compositional PerMANOVA — permanova_compos • MicroBioMeta

compositional PerMANOVA

permanova_compos(data_table, metadata, form, strata_value = NULL, write = TRUE)

Arguments

data_table: a data frame containing the data of features counts (in rows) and samples (in columns)
metadata: a data frame containing the metadata with a column name "sampleid"
form: a formula specifying the model formula in " ".
strata_value: the name of the column in the metadata to use as strata in " ".
write: a logical value indicating whether to save the results to a file

Value

results from the perMANOVA as a data frame

Examples

if (FALSE) {
  permanova_compos(data_table, metadata, form="Material+Tipo",  strata_value="Individuo", write=FALSE)
}